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Programming languages for Bioinformatics


Spring 2017


Course information

Time and location

Friday 10:00 - 11:40

Location: 4-302 Biology Building, The computer lab of the department of Bioinformatics and Biostatistics.

Office Hour

Wednsday 15:00-16:00, Room 4-221, Biology Building Thursday 13:00-14:00, (TA only) Room 4-221, Biology Building

Syllabus

Week Date Lecturer Topics Labs & Guides
1 Feb. 24 Chaochun Wei Introduction to programming languages for bioinformatics Lecture PPTs:
2 March 3 Chaochun Wei Linux and emacs Lecture materials:
3 March 10 Chaochun Wei Brief introduction to C Programming Language Lecture materials:
4 March 17 Chaochun Wei Brief introduction to C Programming Language Lecture materials:
  • The same as above.

Homework:

5 March 24 Chaochun Wei Chapter 2. Types, operators and expressions Lecture materials:

Homework:

6 March 31 Chaochun Wei Chapter 3. Control Flow Lecture materials:

Homework:

7 April 7 Chaochun Wei Chapter 4. Function and Program Structure Lecture materials:

Homework:

8,9 April 14,21 Chaochun Wei Chapter 5. Pointers and Arrays Lecture materials:

Homework:

9,10 April 21,28 Chaochun Wei Chapter 6. Structures Lecture materials:

Homework:

Project 1:

11 May 5 Chaochun Wei Chapter 7. Input and output Lecture materials:
12 May 12 Chaochun Wei Skills Other than Programming language Lecture materials:
13,14,15 May 19 Chaochun Wei Reports from battle fields Lecture PPT: Presentation order:
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    ©2017 Chaochun Wei