;

Gene Information

Basic Gene Information

ID source chrom start end strand CDS length exon number gene ID visualization
4 irgsp1_rep chr01 12721 15685 + 1782 5 Os01g0100400

Gene Categorization (Help)

Core gene Yes
Candidate core gene No
Distributed gene No
Subspecies-unbalanced gene No
Indica-dominant gene No
Japonica-dominant gene No
Subspecies-specific gene No
Indica-specific gene No
Japonica-specific gene No
AUS-specific gene No
ARO-specific gene No
Subgroup-unbalanced gene No
Indica-subgroup-unbalanced gene No
Japonica-subgroup-unbalanced gene No
Random gene No
Gene age PS1

Gene Family

GF58 Core Gene Family

Gene Distribution (Help)

This gene presents in all high-quality rice accessions.

Gene Presence Frequency

The information about subspecies and subgroups.

Gene Ontology

GO:0000271polysaccharide biosynthetic process
GO:0005507copper ion binding
GO:0005576extracellular region
GO:0005618cell wall
GO:0005774vacuolar membrane
GO:0005829cytosol
GO:0005886plasma membrane
GO:0009505plant-type cell wall
GO:0009506plasmodesma
GO:0009825multidimensional cell growth
GO:0009932cell tip growth
GO:0010817regulation of hormone levels
GO:0016020membrane
GO:0016051carbohydrate biosynthetic process
GO:0016491oxidoreductase activity
GO:0030243cellulose metabolic process
GO:0031225anchored component of membrane
GO:0043481anthocyanin accumulation in tissues in response to UV light
GO:0046658anchored component of plasma membrane
GO:0048046apoplast
GO:0048765root hair cell differentiation
GO:0048767root hair elongation
GO:0055114oxidation-reduction process
GO:0071555cell wall organization

CDS(Coding DNA Sequence)

Protein Sequence

If you don't know how to start, examples about how to use this website are provided. If you need further help, feel free to contact us.

Copyright © 2015-2018 The laboratory of computational genomics and metagenomics in Shanghai Jiao Tong University. Institute of Crop Sciences, Chinese Academy of Agricultural Sciences. All Rights Reserved