;

Gene Information

Basic Gene Information

ID source chrom start end strand CDS length exon number gene ID visualization
11 irgsp1_rep chr01 35623 41136 + 1620 15 Os01g0100900

Gene Categorization (Help)

Core gene Yes
Candidate core gene No
Distributed gene No
Subspecies-unbalanced gene No
Indica-dominant gene No
Japonica-dominant gene No
Subspecies-specific gene No
Indica-specific gene No
Japonica-specific gene No
AUS-specific gene No
ARO-specific gene No
Subgroup-unbalanced gene No
Indica-subgroup-unbalanced gene No
Japonica-subgroup-unbalanced gene No
Random gene No
Gene age PS1

Gene Family

GF928 Core Gene Family

Gene Distribution (Help)

This gene presents in all high-quality rice accessions.

Gene Presence Frequency

The information about subspecies and subgroups.

Gene Ontology

GO:0005623cell
GO:0005737cytoplasm
GO:0005783endoplasmic reticulum
GO:0005789endoplasmic reticulum membrane
GO:0006520cellular amino acid metabolic process
GO:0006635fatty acid beta-oxidation
GO:0006888ER to Golgi vesicle-mediated transport
GO:0008117sphinganine-1-phosphate aldolase activity
GO:0009407toxin catabolic process
GO:0016020membrane
GO:0016021integral component of membrane
GO:0016831carboxy-lyase activity
GO:0030149sphingolipid catabolic process
GO:0030170pyridoxal phosphate binding
GO:0043161proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051788response to misfolded protein
GO:0080129proteasome core complex assembly

CDS(Coding DNA Sequence)

Protein Sequence

If you don't know how to start, examples about how to use this website are provided. If you need further help, feel free to contact us.

Copyright © 2015-2018 The laboratory of computational genomics and metagenomics in Shanghai Jiao Tong University. Institute of Crop Sciences, Chinese Academy of Agricultural Sciences. All Rights Reserved