;

Gene Information

Basic Gene Information

ID source chrom start end strand CDS length exon number gene ID visualization
1041 irgsp1_rep chr01 7547017 7551842 + 2100 14 Os01g0236300

Gene Categorization (Help)

Core gene No
Candidate core gene Yes
Distributed gene No
Subspecies-unbalanced gene No
Indica-dominant gene No
Japonica-dominant gene No
Subspecies-specific gene No
Indica-specific gene No
Japonica-specific gene No
AUS-specific gene No
ARO-specific gene No
Subgroup-unbalanced gene No
Indica-subgroup-unbalanced gene No
Japonica-subgroup-unbalanced gene No
Random gene No
Gene age PS5

Gene Family

GF108 Core Gene Family

Gene Distribution (Help)

Gene Presence Frequency

The information about subspecies and subgroups.

Gene Ontology

GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0005515protein binding
GO:0005634nucleus
GO:0006306DNA methylation
GO:0006342chromatin silencing
GO:0006346methylation-dependent chromatin silencing
GO:0006351transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
GO:0007267cell-cell signaling
GO:0009616virus induced gene silencing
GO:0009733response to auxin
GO:0009734auxin-activated signaling pathway
GO:0010150leaf senescence
GO:0010267production of ta-siRNAs involved in RNA interference
GO:0016246RNA interference
GO:0035196production of miRNAs involved in gene silencing by miRNA
GO:0045892negative regulation of transcription, DNA-templated
GO:0046983protein dimerization activity

CDS(Coding DNA Sequence)

Protein Sequence

If you don't know how to start, examples about how to use this website are provided. If you need further help, feel free to contact us.

Copyright © 2015-2018 The laboratory of computational genomics and metagenomics in Shanghai Jiao Tong University. Institute of Crop Sciences, Chinese Academy of Agricultural Sciences. All Rights Reserved