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Gene Information

Basic Gene Information

ID source chrom start end strand CDS length exon number gene ID visualization
1328 irgsp1_rep chr01 10099352 10102948 - 1344 6 Os01g0282800

Gene Categorization (Help)

Core gene Yes
Candidate core gene No
Distributed gene No
Subspecies-unbalanced gene No
Indica-dominant gene No
Japonica-dominant gene No
Subspecies-specific gene No
Indica-specific gene No
Japonica-specific gene No
AUS-specific gene No
ARO-specific gene No
Subgroup-unbalanced gene No
Indica-subgroup-unbalanced gene No
Japonica-subgroup-unbalanced gene No
Random gene No
Gene age PS1

Gene Family

GF327 Core Gene Family

Gene Distribution (Help)

This gene presents in all high-quality rice accessions.

Gene Presence Frequency

The information about subspecies and subgroups.

Gene Ontology

GO:0000271polysaccharide biosynthetic process
GO:0003924GTPase activity
GO:0005200structural constituent of cytoskeleton
GO:0005525GTP binding
GO:0005737cytoplasm
GO:0005874microtubule
GO:0005886plasma membrane
GO:0006084acetyl-CoA metabolic process
GO:0006094gluconeogenesis
GO:0006096glycolytic process
GO:0006184obsolete GTP catabolic process
GO:0006833water transport
GO:0006972hyperosmotic response
GO:0007010cytoskeleton organization
GO:0007017microtubule-based process
GO:0007030Golgi organization
GO:0009266response to temperature stimulus
GO:0009409response to cold
GO:0009651response to salt stress
GO:0009740gibberellic acid mediated signaling pathway
GO:0009825multidimensional cell growth
GO:0009932cell tip growth
GO:0010162seed dormancy process
GO:0010498proteasomal protein catabolic process
GO:0010817regulation of hormone levels
GO:0015630microtubule cytoskeleton
GO:0016126sterol biosynthetic process
GO:0016132brassinosteroid biosynthetic process
GO:0019344cysteine biosynthetic process
GO:0043481anthocyanin accumulation in tissues in response to UV light
GO:0046686response to cadmium ion
GO:0048767root hair elongation
GO:0051258protein polymerization
GO:0071555cell wall organization

CDS(Coding DNA Sequence)

Protein Sequence

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Copyright © 2015-2018 The laboratory of computational genomics and metagenomics in Shanghai Jiao Tong University. Institute of Crop Sciences, Chinese Academy of Agricultural Sciences. All Rights Reserved