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Gene Information

Basic Gene Information

ID source chrom start end strand CDS length exon number gene ID visualization
1337 irgsp1_rep chr01 10164402 10165541 + 1104 1 Os01g0284300

Gene Categorization (Help)

Core gene No
Candidate core gene Yes
Distributed gene No
Subspecies-unbalanced gene No
Indica-dominant gene No
Japonica-dominant gene No
Subspecies-specific gene No
Indica-specific gene No
Japonica-specific gene No
AUS-specific gene No
ARO-specific gene No
Subgroup-unbalanced gene No
Indica-subgroup-unbalanced gene No
Japonica-subgroup-unbalanced gene No
Random gene No
Gene age PS1

Gene Family

GF4 Core Gene Family

Gene Distribution (Help)

Gene Presence Frequency

The information about subspecies and subgroups.

Gene Ontology

GO:0000165MAPK cascade
GO:0002679respiratory burst involved in defense response
GO:0004702receptor signaling protein serine/threonine kinase activity
GO:0004708MAP kinase kinase activity
GO:0005524ATP binding
GO:0005623cell
GO:0005634nucleus
GO:0005737cytoplasm
GO:0006355regulation of transcription, DNA-templated
GO:0006612protein targeting to membrane
GO:0007154cell communication
GO:0009409response to cold
GO:0009570chloroplast stroma
GO:0009595detection of biotic stimulus
GO:0009617response to bacterium
GO:0009626plant-type hypersensitive response
GO:0009697salicylic acid biosynthetic process
GO:0009738abscisic acid-activated signaling pathway
GO:0009814defense response, incompatible interaction
GO:0009862systemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009867jasmonic acid mediated signaling pathway
GO:0010200response to chitin
GO:0010227floral organ abscission
GO:0010229inflorescence development
GO:0010310regulation of hydrogen peroxide metabolic process
GO:0010363regulation of plant-type hypersensitive response
GO:0016301kinase activity
GO:0030968endoplasmic reticulum unfolded protein response
GO:0031348negative regulation of defense response
GO:0035304regulation of protein dephosphorylation
GO:0035556intracellular signal transduction
GO:0042742defense response to bacterium
GO:0043069negative regulation of programmed cell death
GO:0043900regulation of multi-organism process
GO:0045088regulation of innate immune response
GO:0050832defense response to fungus
GO:0061025membrane fusion
GO:2000037regulation of stomatal complex patterning
GO:2000038regulation of stomatal complex development

CDS(Coding DNA Sequence)

Protein Sequence

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Copyright © 2015-2018 The laboratory of computational genomics and metagenomics in Shanghai Jiao Tong University. Institute of Crop Sciences, Chinese Academy of Agricultural Sciences. All Rights Reserved