;

Gene Information

Basic Gene Information

ID source chrom start end strand CDS length exon number gene ID visualization
1405 irgsp1_rep chr01 10999316 11005978 - 1827 19 Os01g0300200

Gene Categorization (Help)

Core gene Yes
Candidate core gene No
Distributed gene No
Subspecies-unbalanced gene No
Indica-dominant gene No
Japonica-dominant gene No
Subspecies-specific gene No
Indica-specific gene No
Japonica-specific gene No
AUS-specific gene No
ARO-specific gene No
Subgroup-unbalanced gene No
Indica-subgroup-unbalanced gene No
Japonica-subgroup-unbalanced gene No
Random gene No
Gene age PS1

Gene Family

GF4062 Core Gene Family

Gene Distribution (Help)

This gene presents in all high-quality rice accessions.

Gene Presence Frequency

The information about subspecies and subgroups.

Gene Ontology

GO:0003878ATP citrate synthase activity
GO:0004775succinate-CoA ligase (ADP-forming) activity
GO:0005524ATP binding
GO:0005737cytoplasm
GO:0005829cytosol
GO:0005886plasma membrane
GO:0006084acetyl-CoA metabolic process
GO:0006085acetyl-CoA biosynthetic process
GO:0009346citrate lyase complex
GO:0010228vegetative to reproductive phase transition of meristem
GO:0016126sterol biosynthetic process
GO:0016132brassinosteroid biosynthetic process
GO:0016926protein desumoylation
GO:0044262cellular carbohydrate metabolic process
GO:0046872metal ion binding
GO:0050665hydrogen peroxide biosynthetic process

CDS(Coding DNA Sequence)

Protein Sequence

If you don't know how to start, examples about how to use this website are provided. If you need further help, feel free to contact us.

Copyright © 2015-2018 The laboratory of computational genomics and metagenomics in Shanghai Jiao Tong University. Institute of Crop Sciences, Chinese Academy of Agricultural Sciences. All Rights Reserved