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Gene Information

Basic Gene Information

ID source chrom start end strand CDS length exon number gene ID visualization
1821 irgsp1_rep chr01 17349338 17350785 + 1002 2 Os01g0501800

Gene Categorization (Help)

Core gene Yes
Candidate core gene No
Distributed gene No
Subspecies-unbalanced gene No
Indica-dominant gene No
Japonica-dominant gene No
Subspecies-specific gene No
Indica-specific gene No
Japonica-specific gene No
AUS-specific gene No
ARO-specific gene No
Subgroup-unbalanced gene No
Indica-subgroup-unbalanced gene No
Japonica-subgroup-unbalanced gene No
Random gene No
Gene age PS1

Gene Family

GF7600 Core Gene Family

Gene Distribution (Help)

This gene presents in all high-quality rice accessions.

Gene Presence Frequency

The information about subspecies and subgroups.

Gene Ontology

GO:0000165MAPK cascade
GO:0005515protein binding
GO:0006098pentose-phosphate shunt
GO:0006355regulation of transcription, DNA-templated
GO:0006364rRNA processing
GO:0006612protein targeting to membrane
GO:0008266poly(U) RNA binding
GO:0009279cell outer membrane
GO:0009507chloroplast
GO:0009534chloroplast thylakoid
GO:0009535chloroplast thylakoid membrane
GO:0009543chloroplast thylakoid lumen
GO:0009570chloroplast stroma
GO:0009579thylakoid
GO:0009617response to bacterium
GO:0009654photosystem II oxygen evolving complex
GO:0009657plastid organization
GO:0009773photosynthetic electron transport in photosystem I
GO:0009862systemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009867jasmonic acid mediated signaling pathway
GO:0009902chloroplast relocation
GO:0009965leaf morphogenesis
GO:0010027thylakoid membrane organization
GO:0010205photoinhibition
GO:0010207photosystem II assembly
GO:0010242oxygen evolving activity
GO:0010287plastoglobule
GO:0010310regulation of hydrogen peroxide metabolic process
GO:0010363regulation of plant-type hypersensitive response
GO:0016021integral component of membrane
GO:0019684photosynthesis, light reaction
GO:0019761glucosinolate biosynthetic process
GO:0019898extrinsic component of membrane
GO:0030003cellular cation homeostasis
GO:0030095chloroplast photosystem II
GO:0030154cell differentiation
GO:0031348negative regulation of defense response
GO:0031977thylakoid lumen
GO:0035304regulation of protein dephosphorylation
GO:0042549photosystem II stabilization
GO:0042742defense response to bacterium
GO:0042793transcription from plastid promoter
GO:0045893positive regulation of transcription, DNA-templated
GO:0070838divalent metal ion transport

CDS(Coding DNA Sequence)

Protein Sequence

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