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Gene Information

Basic Gene Information

ID source chrom start end strand CDS length exon number gene ID visualization
2156 irgsp1_rep chr01 22120320 22128679 + 2421 23 Os01g0575000

Gene Categorization (Help)

Core gene Yes
Candidate core gene No
Distributed gene No
Subspecies-unbalanced gene No
Indica-dominant gene No
Japonica-dominant gene No
Subspecies-specific gene No
Indica-specific gene No
Japonica-specific gene No
AUS-specific gene No
ARO-specific gene No
Subgroup-unbalanced gene No
Indica-subgroup-unbalanced gene No
Japonica-subgroup-unbalanced gene No
Random gene No
Gene age PS2

Gene Family

GF1925 Core Gene Family

Gene Distribution (Help)

This gene presents in all high-quality rice accessions.

Gene Presence Frequency

The information about subspecies and subgroups.

Gene Ontology

GO:0000139Golgi membrane
GO:0000902cell morphogenesis
GO:0003924GTPase activity
GO:0005525GTP binding
GO:0005623cell
GO:0005634nucleus
GO:0005737cytoplasm
GO:0005774vacuolar membrane
GO:0005783endoplasmic reticulum
GO:0005789endoplasmic reticulum membrane
GO:0005886plasma membrane
GO:0006612protein targeting to membrane
GO:0006820anion transport
GO:0006862nucleotide transport
GO:0006865amino acid transport
GO:0006886intracellular protein transport
GO:0006888ER to Golgi vesicle-mediated transport
GO:0009832plant-type cell wall biogenesis
GO:0009932cell tip growth
GO:0010053root epidermal cell differentiation
GO:0010363regulation of plant-type hypersensitive response
GO:0015696ammonium transport
GO:0015802basic amino acid transport
GO:0016021integral component of membrane
GO:0016049cell growth
GO:0016051carbohydrate biosynthetic process
GO:0030036actin cytoskeleton organization
GO:0030243cellulose metabolic process
GO:0043069negative regulation of programmed cell death
GO:0043090amino acid import
GO:0043269regulation of ion transport
GO:0048193Golgi vesicle transport
GO:0048527lateral root development
GO:0048765root hair cell differentiation
GO:0061025membrane fusion

CDS(Coding DNA Sequence)

Protein Sequence

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Copyright © 2015-2018 The laboratory of computational genomics and metagenomics in Shanghai Jiao Tong University. Institute of Crop Sciences, Chinese Academy of Agricultural Sciences. All Rights Reserved