;

Gene Information

Basic Gene Information

ID source chrom start end strand CDS length exon number gene ID visualization
3002 irgsp1_rep chr01 29364593 29367878 + 666 5 Os01g0707300

Gene Categorization (Help)

Core gene Yes
Candidate core gene No
Distributed gene No
Subspecies-unbalanced gene No
Indica-dominant gene No
Japonica-dominant gene No
Subspecies-specific gene No
Indica-specific gene No
Japonica-specific gene No
AUS-specific gene No
ARO-specific gene No
Subgroup-unbalanced gene No
Indica-subgroup-unbalanced gene No
Japonica-subgroup-unbalanced gene No
Random gene No
Gene age PS2

Gene Family

GF1912 Core Gene Family

Gene Distribution (Help)

This gene presents in all high-quality rice accessions.

Gene Presence Frequency

The information about subspecies and subgroups.

Gene Ontology

GO:0000149SNARE binding
GO:0000902cell morphogenesis
GO:0004872receptor activity
GO:0005483soluble NSF attachment protein activity
GO:0005484SNAP receptor activity
GO:0005515protein binding
GO:0005623cell
GO:0005634nucleus
GO:0005768endosome
GO:0005770late endosome
GO:0005789endoplasmic reticulum membrane
GO:0005794Golgi apparatus
GO:0005802trans-Golgi network
GO:0005886plasma membrane
GO:0006623protein targeting to vacuole
GO:0006869lipid transport
GO:0006888ER to Golgi vesicle-mediated transport
GO:0006891intra-Golgi vesicle-mediated transport
GO:0006896Golgi to vacuole transport
GO:0010351lithium ion transport
GO:0012507ER to Golgi transport vesicle membrane
GO:0016021integral component of membrane
GO:0016049cell growth
GO:0016192vesicle-mediated transport
GO:0016197endosomal transport
GO:0016558protein import into peroxisome matrix
GO:0031201SNARE complex
GO:0031902late endosome membrane
GO:0042147retrograde transport, endosome to Golgi
GO:0046907intracellular transport
GO:0048193Golgi vesicle transport
GO:0048280vesicle fusion with Golgi apparatus
GO:0061025membrane fusion

CDS(Coding DNA Sequence)

Protein Sequence

If you don't know how to start, examples about how to use this website are provided. If you need further help, feel free to contact us.

Copyright © 2015-2018 The laboratory of computational genomics and metagenomics in Shanghai Jiao Tong University. Institute of Crop Sciences, Chinese Academy of Agricultural Sciences. All Rights Reserved