;

Gene Information

Basic Gene Information

ID source chrom start end strand CDS length exon number gene ID visualization
3950 irgsp1_rep chr01 36222348 36228582 + 1824 13 Os01g0843300

Gene Categorization (Help)

Core gene Yes
Candidate core gene No
Distributed gene No
Subspecies-unbalanced gene No
Indica-dominant gene No
Japonica-dominant gene No
Subspecies-specific gene No
Indica-specific gene No
Japonica-specific gene No
AUS-specific gene No
ARO-specific gene No
Subgroup-unbalanced gene No
Indica-subgroup-unbalanced gene No
Japonica-subgroup-unbalanced gene No
Random gene No
Gene age PS2

Gene Family

GF2419 Core Gene Family

Gene Distribution (Help)

This gene presents in all high-quality rice accessions.

Gene Presence Frequency

The information about subspecies and subgroups.

Gene Ontology

GO:0000003reproduction
GO:0000741karyogamy
GO:0003924GTPase activity
GO:0005509calcium ion binding
GO:0005525GTP binding
GO:0005739mitochondrion
GO:0005741mitochondrial outer membrane
GO:0005829cytosol
GO:0006312mitotic recombination
GO:0006325chromatin organization
GO:0006626protein targeting to mitochondrion
GO:0007005mitochondrion organization
GO:0007131reciprocal meiotic recombination
GO:0007264small GTPase mediated signal transduction
GO:0009560embryo sac egg cell differentiation
GO:0009640photomorphogenesis
GO:0009793embryo development ending in seed dormancy
GO:0009845seed germination
GO:0009860pollen tube growth
GO:0009909regulation of flower development
GO:0009933meristem structural organization
GO:0010090trichome morphogenesis
GO:0010162seed dormancy process
GO:0010182sugar mediated signaling pathway
GO:0010228vegetative to reproductive phase transition of meristem
GO:0010638positive regulation of organelle organization
GO:0016567protein ubiquitination
GO:0019725cellular homeostasis
GO:0019915lipid storage
GO:0030048actin filament-based movement
GO:0033044regulation of chromosome organization
GO:0048825cotyledon development
GO:0050826response to freezing
GO:0051301cell division
GO:0051604protein maturation
GO:0051645Golgi localization
GO:0051646mitochondrion localization
GO:0060151peroxisome localization
GO:0090406pollen tube

CDS(Coding DNA Sequence)

Protein Sequence

If you don't know how to start, examples about how to use this website are provided. If you need further help, feel free to contact us.

Copyright © 2015-2018 The laboratory of computational genomics and metagenomics in Shanghai Jiao Tong University. Institute of Crop Sciences, Chinese Academy of Agricultural Sciences. All Rights Reserved