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Gene Information

Basic Gene Information

ID source chrom start end strand CDS length exon number gene ID visualization
3987 irgsp1_rep chr01 36445456 36449951 - 1839 6 Os01g0848400

Gene Categorization (Help)

Core gene Yes
Candidate core gene No
Distributed gene No
Subspecies-unbalanced gene No
Indica-dominant gene No
Japonica-dominant gene No
Subspecies-specific gene No
Indica-specific gene No
Japonica-specific gene No
AUS-specific gene No
ARO-specific gene No
Subgroup-unbalanced gene No
Indica-subgroup-unbalanced gene No
Japonica-subgroup-unbalanced gene No
Random gene No
Gene age PS1

Gene Family

GF3836 Core Gene Family

Gene Distribution (Help)

This gene presents in all high-quality rice accessions.

Gene Presence Frequency

The information about subspecies and subgroups.

Gene Ontology

GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0005515protein binding
GO:0005634nucleus
GO:0005829cytosol
GO:0006306DNA methylation
GO:0006342chromatin silencing
GO:0006346methylation-dependent chromatin silencing
GO:0006351transcription, DNA-templated
GO:0007267cell-cell signaling
GO:0007389pattern specification process
GO:0009616virus induced gene silencing
GO:0009855determination of bilateral symmetry
GO:0009886post-embryonic morphogenesis
GO:0009887organ morphogenesis
GO:0009909regulation of flower development
GO:0009944polarity specification of adaxial/abaxial axis
GO:0010014meristem initiation
GO:0010051xylem and phloem pattern formation
GO:0010076maintenance of floral meristem identity
GO:0010077maintenance of inflorescence meristem identity
GO:0010089xylem development
GO:0010154fruit development
GO:0010223secondary shoot formation
GO:0010228vegetative to reproductive phase transition of meristem
GO:0010267production of ta-siRNAs involved in RNA interference
GO:0016246RNA interference
GO:0035196production of miRNAs involved in gene silencing by miRNA
GO:0043565sequence-specific DNA binding
GO:0045892negative regulation of transcription, DNA-templated
GO:0048367shoot system development
GO:0048438floral whorl development
GO:0048439flower morphogenesis
GO:0048457floral whorl morphogenesis
GO:0048481plant ovule development
GO:0048507meristem development
GO:0048513animal organ development
GO:0048519negative regulation of biological process
GO:0048645organ formation
GO:0080006internode patterning

CDS(Coding DNA Sequence)

Protein Sequence

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