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Gene Information

Basic Gene Information

ID source chrom start end strand CDS length exon number gene ID visualization
4037 irgsp1_rep chr01 36998338 37004512 + 1479 8 Os01g0856500

Gene Categorization (Help)

Core gene Yes
Candidate core gene No
Distributed gene No
Subspecies-unbalanced gene No
Indica-dominant gene No
Japonica-dominant gene No
Subspecies-specific gene No
Indica-specific gene No
Japonica-specific gene No
AUS-specific gene No
ARO-specific gene No
Subgroup-unbalanced gene No
Indica-subgroup-unbalanced gene No
Japonica-subgroup-unbalanced gene No
Random gene No
Gene age PS2

Gene Family

GF1159 Core Gene Family

Gene Distribution (Help)

This gene presents in all high-quality rice accessions.

Gene Presence Frequency

The information about subspecies and subgroups.

Gene Ontology

GO:0000271polysaccharide biosynthetic process
GO:0001736establishment of planar polarity
GO:0003333amino acid transmembrane transport
GO:0005215transporter activity
GO:0005768endosome
GO:0005794Golgi apparatus
GO:0005886plasma membrane
GO:0006865amino acid transport
GO:0006949syncytium formation
GO:0007155cell adhesion
GO:0007389pattern specification process
GO:0008361regulation of cell size
GO:0009624response to nematode
GO:0009723response to ethylene
GO:0009733response to auxin
GO:0009734auxin-activated signaling pathway
GO:0009825multidimensional cell growth
GO:0009926auxin polar transport
GO:0009932cell tip growth
GO:0009958positive gravitropism
GO:0009986cell surface
GO:0010011auxin binding
GO:0010015root morphogenesis
GO:0010090trichome morphogenesis
GO:0010218response to far red light
GO:0010311lateral root formation
GO:0010328auxin influx transmembrane transporter activity
GO:0010817regulation of hormone levels
GO:0015171amino acid transmembrane transporter activity
GO:0015293symporter activity
GO:0016020membrane
GO:0016021integral component of membrane
GO:0040007growth
GO:0043481anthocyanin accumulation in tissues in response to UV light
GO:0045010actin nucleation
GO:0048765root hair cell differentiation
GO:0048767root hair elongation
GO:0048829root cap development
GO:0071555cell wall organization

CDS(Coding DNA Sequence)

Protein Sequence

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Copyright © 2015-2018 The laboratory of computational genomics and metagenomics in Shanghai Jiao Tong University. Institute of Crop Sciences, Chinese Academy of Agricultural Sciences. All Rights Reserved