;

Gene Information

Basic Gene Information

ID source chrom start end strand CDS length exon number gene ID visualization
4359 irgsp1_rep chr01 39066177 39068629 + 1236 6 Os01g0898500

Gene Categorization (Help)

Core gene Yes
Candidate core gene No
Distributed gene No
Subspecies-unbalanced gene No
Indica-dominant gene No
Japonica-dominant gene No
Subspecies-specific gene No
Indica-specific gene No
Japonica-specific gene No
AUS-specific gene No
ARO-specific gene No
Subgroup-unbalanced gene No
Indica-subgroup-unbalanced gene No
Japonica-subgroup-unbalanced gene No
Random gene No
Gene age PS1

Gene Family

GF205 Core Gene Family

Gene Distribution (Help)

This gene presents in all high-quality rice accessions.

Gene Presence Frequency

The information about subspecies and subgroups.

Gene Ontology

GO:0000165MAPK cascade
GO:0002237response to molecule of bacterial origin
GO:0002679respiratory burst involved in defense response
GO:0005623cell
GO:0005737cytoplasm
GO:0006612protein targeting to membrane
GO:0006629lipid metabolic process
GO:0008219cell death
GO:0009507chloroplast
GO:0009595detection of biotic stimulus
GO:0009626plant-type hypersensitive response
GO:0009646response to absence of light
GO:0009697salicylic acid biosynthetic process
GO:0009723response to ethylene
GO:0009862systemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009863salicylic acid mediated signaling pathway
GO:0009867jasmonic acid mediated signaling pathway
GO:0010200response to chitin
GO:0010310regulation of hydrogen peroxide metabolic process
GO:0010363regulation of plant-type hypersensitive response
GO:0016020membrane
GO:0016042lipid catabolic process
GO:0016298lipase activity
GO:0031348negative regulation of defense response
GO:0031408oxylipin biosynthetic process
GO:0042742defense response to bacterium
GO:0043069negative regulation of programmed cell death
GO:0043900regulation of multi-organism process
GO:0045735nutrient reservoir activity
GO:0046686response to cadmium ion
GO:0050832defense response to fungus
GO:0051607defense response to virus
GO:0051707response to other organism
GO:0061025membrane fusion
GO:0071456cellular response to hypoxia

CDS(Coding DNA Sequence)

Protein Sequence

If you don't know how to start, examples about how to use this website are provided. If you need further help, feel free to contact us.

Copyright © 2015-2018 The laboratory of computational genomics and metagenomics in Shanghai Jiao Tong University. Institute of Crop Sciences, Chinese Academy of Agricultural Sciences. All Rights Reserved