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Gene Information

Basic Gene Information

ID source chrom start end strand CDS length exon number gene ID visualization
4575 irgsp1_rep chr01 40654238 40664395 + 1992 15 Os01g0927000

Gene Categorization (Help)

Core gene Yes
Candidate core gene No
Distributed gene No
Subspecies-unbalanced gene No
Indica-dominant gene No
Japonica-dominant gene No
Subspecies-specific gene No
Indica-specific gene No
Japonica-specific gene No
AUS-specific gene No
ARO-specific gene No
Subgroup-unbalanced gene No
Indica-subgroup-unbalanced gene No
Japonica-subgroup-unbalanced gene No
Random gene No
Gene age PS1

Gene Family

GF286 Core Gene Family

Gene Distribution (Help)

This gene presents in all high-quality rice accessions.

Gene Presence Frequency

The information about subspecies and subgroups.

Gene Ontology

GO:0000226microtubule cytoskeleton organization
GO:0000775chromosome, centromeric region
GO:0000911cytokinesis by cell plate formation
GO:0005634nucleus
GO:0006260DNA replication
GO:0006270DNA replication initiation
GO:0006275regulation of DNA replication
GO:0006306DNA methylation
GO:0006342chromatin silencing
GO:0006346methylation-dependent chromatin silencing
GO:0007267cell-cell signaling
GO:0008270zinc ion binding
GO:0008283cell proliferation
GO:0008327methyl-CpG binding
GO:0009616virus induced gene silencing
GO:0009640photomorphogenesis
GO:0009855determination of bilateral symmetry
GO:0010014meristem initiation
GO:0010073meristem maintenance
GO:0010216maintenance of DNA methylation
GO:0010267production of ta-siRNAs involved in RNA interference
GO:0010385double-stranded methylated DNA binding
GO:0010388cullin deneddylation
GO:0010428methyl-CpNpG binding
GO:0010429methyl-CpNpN binding
GO:0016567protein ubiquitination
GO:0016571histone methylation
GO:0016572histone phosphorylation
GO:0016579protein deubiquitination
GO:0018022peptidyl-lysine methylation
GO:0031047gene silencing by RNA
GO:0031048chromatin silencing by small RNA
GO:0035196production of miRNAs involved in gene silencing by miRNA
GO:0042393histone binding
GO:0045893positive regulation of transcription, DNA-templated
GO:0046974histone methyltransferase activity (H3-K9 specific)
GO:0051567histone H3-K9 methylation
GO:0051726regulation of cell cycle

CDS(Coding DNA Sequence)

Protein Sequence

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