;

Gene Information

Basic Gene Information

ID source chrom start end strand CDS length exon number gene ID visualization
5952 irgsp1_rep chr02 7097062 7100301 + 1620 5 Os02g0226600

Gene Categorization (Help)

Core gene No
Candidate core gene No
Distributed gene Yes
Subspecies-unbalanced gene No
Indica-dominant gene No
Japonica-dominant gene No
Subspecies-specific gene No
Indica-specific gene No
Japonica-specific gene No
AUS-specific gene No
ARO-specific gene No
Subgroup-unbalanced gene No
Indica-subgroup-unbalanced gene No
Japonica-subgroup-unbalanced gene No
Random gene Yes
Gene age PS1

Gene Family

GF9011 Distributed Gene Family

Gene Distribution (Help)

Gene Presence Frequency

The information about subspecies and subgroups.

Gene Ontology

GO:0000096sulfur amino acid metabolic process
GO:0003677DNA binding
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0005515protein binding
GO:0005634nucleus
GO:0006351transcription, DNA-templated
GO:0006546glycine catabolic process
GO:0006636unsaturated fatty acid biosynthetic process
GO:0006733oxidoreduction coenzyme metabolic process
GO:0006766vitamin metabolic process
GO:0008285negative regulation of cell proliferation
GO:0008652cellular amino acid biosynthetic process
GO:0009072aromatic amino acid family metabolic process
GO:0009106lipoate metabolic process
GO:0009108coenzyme biosynthetic process
GO:0009117nucleotide metabolic process
GO:0009416response to light stimulus
GO:0009640photomorphogenesis
GO:0009695jasmonic acid biosynthetic process
GO:0009793embryo development ending in seed dormancy
GO:0009965leaf morphogenesis
GO:0010027thylakoid membrane organization
GO:0010073meristem maintenance
GO:0010103stomatal complex morphogenesis
GO:0010227floral organ abscission
GO:0010228vegetative to reproductive phase transition of meristem
GO:0010371regulation of gibberellin biosynthetic process
GO:0015994chlorophyll metabolic process
GO:0015995chlorophyll biosynthetic process
GO:0016117carotenoid biosynthetic process
GO:0016226iron-sulfur cluster assembly
GO:0016556mRNA modification
GO:0019216regulation of lipid metabolic process
GO:0019288isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
GO:0019748secondary metabolic process
GO:0030154cell differentiation
GO:0031408oxylipin biosynthetic process
GO:0043565sequence-specific DNA binding
GO:0044272sulfur compound biosynthetic process
GO:0045893positive regulation of transcription, DNA-templated
GO:0048481plant ovule development
GO:0048513animal organ development
GO:0090470shoot organ boundary specification

CDS(Coding DNA Sequence)

Protein Sequence

If you don't know how to start, examples about how to use this website are provided. If you need further help, feel free to contact us.

Copyright © 2015-2018 The laboratory of computational genomics and metagenomics in Shanghai Jiao Tong University. Institute of Crop Sciences, Chinese Academy of Agricultural Sciences. All Rights Reserved