;

Gene Information

Basic Gene Information

ID source chrom start end strand CDS length exon number gene ID visualization
8425 irgsp1_rep chr02 32558636 32562547 + 966 3 Os02g0771600

Gene Categorization (Help)

Core gene No
Candidate core gene Yes
Distributed gene No
Subspecies-unbalanced gene Yes
Indica-dominant gene No
Japonica-dominant gene No
Subspecies-specific gene No
Indica-specific gene No
Japonica-specific gene No
AUS-specific gene No
ARO-specific gene No
Subgroup-unbalanced gene No
Indica-subgroup-unbalanced gene No
Japonica-subgroup-unbalanced gene No
Random gene No
Gene age PS1

Gene Family

GF15 Core Gene Family

Gene Distribution (Help)

Gene Presence Frequency

The information about subspecies and subgroups.

Gene Ontology

GO:0000165MAPK cascade
GO:0005623cell
GO:0005737cytoplasm
GO:0006612protein targeting to membrane
GO:0009595detection of biotic stimulus
GO:0009620response to fungus
GO:0009693ethylene biosynthetic process
GO:0009697salicylic acid biosynthetic process
GO:00098151-aminocyclopropane-1-carboxylate oxidase activity
GO:0009835fruit ripening
GO:0009862systemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009867jasmonic acid mediated signaling pathway
GO:0010200response to chitin
GO:0010310regulation of hydrogen peroxide metabolic process
GO:0010363regulation of plant-type hypersensitive response
GO:0016706oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0030003cellular cation homeostasis
GO:0031348negative regulation of defense response
GO:0031418L-ascorbic acid binding
GO:0042742defense response to bacterium
GO:0043900regulation of multi-organism process
GO:0046872metal ion binding
GO:0050832defense response to fungus
GO:0055114oxidation-reduction process
GO:0070838divalent metal ion transport
GO:0071398cellular response to fatty acid

CDS(Coding DNA Sequence)

Protein Sequence

If you don't know how to start, examples about how to use this website are provided. If you need further help, feel free to contact us.

Copyright © 2015-2018 The laboratory of computational genomics and metagenomics in Shanghai Jiao Tong University. Institute of Crop Sciences, Chinese Academy of Agricultural Sciences. All Rights Reserved